Package: gnonadd 1.0.2
Audunn S. Snaebjarnarson
gnonadd: Various Non-Additive Models for Genetic Associations
The goal of 'gnonadd' is to simplify workflows in the analysis of non-additive effects of sequence variants. This includes variance effects (Ivarsdottir et. al (2017) <doi:10.1038/ng.3928>), correlation effects, interaction effects and dominance effects. The package also includes convenience functions for visualization.
Authors:
gnonadd_1.0.2.tar.gz
gnonadd_1.0.2.zip(r-4.5)gnonadd_1.0.2.zip(r-4.4)gnonadd_1.0.2.zip(r-4.3)
gnonadd_1.0.2.tgz(r-4.4-any)gnonadd_1.0.2.tgz(r-4.3-any)
gnonadd_1.0.2.tar.gz(r-4.5-noble)gnonadd_1.0.2.tar.gz(r-4.4-noble)
gnonadd_1.0.2.tgz(r-4.4-emscripten)gnonadd_1.0.2.tgz(r-4.3-emscripten)
gnonadd.pdf |gnonadd.html✨
gnonadd/json (API)
NEWS
| # Install 'gnonadd' in R: |
| install.packages('gnonadd', repos = c('https://decodegenetics.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/decodegenetics/gnonadd/issues
Last updated 1 years agofrom:161d291a29. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Nov 12 2024 |
| R-4.5-win | OK | Nov 12 2024 |
| R-4.5-linux | OK | Nov 12 2024 |
| R-4.4-win | OK | Nov 12 2024 |
| R-4.4-mac | OK | Nov 12 2024 |
| R-4.3-win | OK | Nov 12 2024 |
| R-4.3-mac | OK | Nov 12 2024 |
Exports:alpha.calcalpha.condalpha.continuous.condalpha.multi.estcorr.calibrationdominance_CC.calcdominance.calcellipse.by.genenv_interaction_CC.calcenv_interaction.calcexpected.variance.effecthist_by_geninteraction_CC.calcinteraction.calckappa_calcpairwise_env_int_CC.calcpairwise_env_int.calcpairwise_int_CC.calcpairwise_int.calcPRS_creatortrain_and_impute_PRSvar.adjVar.assocvar.summaryVarGS.plotViol.by.gen
Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr
