Package: gnonadd 1.0.2

Audunn S. Snaebjarnarson

gnonadd: Various Non-Additive Models for Genetic Associations

The goal of 'gnonadd' is to simplify workflows in the analysis of non-additive effects of sequence variants. This includes variance effects (Ivarsdottir et. al (2017) <doi:10.1038/ng.3928>), correlation effects, interaction effects and dominance effects. The package also includes convenience functions for visualization.

Authors:Audunn S. Snaebjarnarson [aut, cre, ctb], Gudmundur Einarsson [aut, ctb], Daniel F. Gudbjartsson [aut, ctb], deCODE Genetics/AMGEN [cph, fnd]

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gnonadd.pdf |gnonadd.html✨
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Bug tracker:https://github.com/decodegenetics/gnonadd/issues

On CRAN:

26 exports 1 stars 1.02 score 28 dependencies 190 downloads

Last updated 12 months agofrom:161d291a29. Checks:OK: 7. Indexed: yes.

Exports:alpha.calcalpha.condalpha.continuous.condalpha.multi.estcorr.calibrationdominance_CC.calcdominance.calcellipse.by.genenv_interaction_CC.calcenv_interaction.calcexpected.variance.effecthist_by_geninteraction_CC.calcinteraction.calckappa_calcpairwise_env_int_CC.calcpairwise_env_int.calcpairwise_int_CC.calcpairwise_int.calcPRS_creatortrain_and_impute_PRSvar.adjVar.assocvar.summaryVarGS.plotViol.by.gen

Dependencies:clicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithr