Package: gnonadd 1.0.3

Audunn S. Snaebjarnarson

gnonadd: Various Non-Additive Models for Genetic Associations

The goal of 'gnonadd' is to simplify workflows in the analysis of non-additive effects of sequence variants. This includes variance effects (Ivarsdottir et. al (2017) <doi:10.1038/ng.3928>), correlation effects, interaction effects and dominance effects. The package also includes convenience functions for visualization.

Authors:Audunn S. Snaebjarnarson [aut, cre, ctb], Gudmundur Einarsson [aut, ctb], Daniel F. Gudbjartsson [aut, ctb], deCODE Genetics/AMGEN [cph, fnd]

gnonadd_1.0.3.tar.gz
gnonadd_1.0.3.zip(r-4.7)gnonadd_1.0.3.zip(r-4.6)gnonadd_1.0.3.zip(r-4.5)
gnonadd_1.0.3.tgz(r-4.6-any)gnonadd_1.0.3.tgz(r-4.5-any)
gnonadd_1.0.3.tar.gz(r-4.7-any)gnonadd_1.0.3.tar.gz(r-4.6-any)
gnonadd_1.0.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
gnonadd/json (API)
NEWS

# Install 'gnonadd' in R:
install.packages('gnonadd', repos = c('https://decodegenetics.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/decodegenetics/gnonadd/issues

On CRAN:

Conda:

3.00 score 2 stars 167 downloads 26 exports 17 dependencies

Last updated from:b87d8f5480. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK120
source / vignettesOK130
linux-release-x86_64OK114
macos-release-arm64OK145
macos-oldrel-arm64OK144
windows-develOK88
windows-releaseOK77
windows-oldrelOK171
wasm-releaseOK94

Exports:alpha.calcalpha.condalpha.continuous.condalpha.multi.estcorr.calibrationdominance_CC.calcdominance.calcellipse.by.genenv_interaction_CC.calcenv_interaction.calcexpected.variance.effecthist_by_geninteraction_CC.calcinteraction.calckappa_calcpairwise_env_int_CC.calcpairwise_env_int.calcpairwise_int_CC.calcpairwise_int.calcPRS_creatortrain_and_impute_PRSvar.adjVar.assocvar.summaryVarGS.plotViol.by.gen

Dependencies:clicpp11farverggplot2gluegtableisobandlabelinglifecycleR6RColorBrewerrlangS7scalesvctrsviridisLitewithr